HL_4V5Q_083

3D structure

PDB id

4V5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

4V5Q|1|BA|G|1740

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5Q_083 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.363

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4V5Q|1|BA|U|1720
4V5Q|1|BA|G|1721
4V5Q|1|BA|A|1722
4V5Q|1|BA|U|1739
4V5Q|1|BA|G|1740
4V5Q|1|BA|A|1741
4V5Q|1|BA|G|1742

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains