HL_4V5Q_175
3D structure
- PDB id
- 4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAAAG
- Length
- 7 nucleotides
- Bulged bases
- 4V5Q|1|DA|A|781
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5Q_175 not in the Motif Atlas
- Geometric match to HL_2NUE_001
- Geometric discrepancy: 0.3496
- The information below is about HL_2NUE_001
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_53890.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4V5Q|1|DA|U|779
4V5Q|1|DA|G|780
4V5Q|1|DA|A|781
4V5Q|1|DA|A|782
4V5Q|1|DA|A|783
4V5Q|1|DA|A|784
4V5Q|1|DA|G|785
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DD
- 50S RIBOSOMAL PROTEIN L2
Coloring options: