HL_4V5R_117
3D structure
- PDB id
- 4V5R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUAAUGGC
- Length
- 9 nucleotides
- Bulged bases
- 4V5R|1|CA|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5R_117 not in the Motif Atlas
- Homologous match to HL_4LFB_006
- Geometric discrepancy: 0.0825
- The information below is about HL_4LFB_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_36455.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V5R|1|CA|G|259
4V5R|1|CA|G|260
4V5R|1|CA|U|261
4V5R|1|CA|A|262
4V5R|1|CA|A|263
4V5R|1|CA|U|264
4V5R|1|CA|G|265
4V5R|1|CA|G|266
4V5R|1|CA|C|267
Current chains
- Chain CA
- 16S RRNA
Nearby chains
- Chain CQ
- 30S RIBOSOMAL PROTEIN S17
- Chain CT
- 30S RIBOSOMAL PROTEIN S20
Coloring options: