HL_4V5S_090
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases (A, C, G, U)
- 2030A, 2031A, 2032G
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5S_090 not in the Motif Atlas
- Homologous match to HL_7RQB_050
- Geometric discrepancy: 0.1205
- The information below is about HL_7RQB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.6
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V5S|1|BA|G|2027
4V5S|1|BA|U|2028
4V5S|1|BA|G|2029
4V5S|1|BA|A|2030
4V5S|1|BA|A|2031
4V5S|1|BA|G|2032
4V5S|1|BA|A|2033
4V5S|1|BA|U|2034
4V5S|1|BA|G|2035
4V5S|1|BA|C|2036
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B5
- 50S RIBOSOMAL PROTEIN L32
- Chain BE
- 50S RIBOSOMAL PROTEIN L3
- Chain BU
- 50S RIBOSOMAL PROTEIN L20
Coloring options: