HL_4V5S_177
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCCCACCAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5S_177 not in the Motif Atlas
- Geometric match to HL_8KAL_003
- Geometric discrepancy: 0.2209
- The information below is about HL_8KAL_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
4V5S|1|DA|G|883
4V5S|1|DA|C|884
4V5S|1|DA|C|885
4V5S|1|DA|C|886
4V5S|1|DA|A|887
4V5S|1|DA|C|888
4V5S|1|DA|C|889
4V5S|1|DA|A|890
4V5S|1|DA|G|892
4V5S|1|DA|C|893
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain CM
- 30S RIBOSOMAL PROTEIN S13
- Chain CS
- 30S RIBOSOMAL PROTEIN S19
Coloring options: