3D structure

PDB id
4V5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GCCCACCAGC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V5S_177 not in the Motif Atlas
Geometric match to HL_8KAL_003
Geometric discrepancy: 0.2209
The information below is about HL_8KAL_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

4V5S|1|DA|G|883
4V5S|1|DA|C|884
4V5S|1|DA|C|885
4V5S|1|DA|C|886
4V5S|1|DA|A|887
4V5S|1|DA|C|888
4V5S|1|DA|C|889
4V5S|1|DA|A|890
4V5S|1|DA|G|892
4V5S|1|DA|C|893

Current chains

Chain DA
23S RIBOSOMAL RNA

Nearby chains

Chain CM
30S RIBOSOMAL PROTEIN S13
Chain CS
30S RIBOSOMAL PROTEIN S19

Coloring options:


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