HL_4V5S_219

3D structure

PDB id

4V5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGUCAAGCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5S_219 not in the Motif Atlas

Geometric match to HL_8H9D_001

Geometric discrepancy: 0.3209

The information below is about HL_8H9D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.1

Basepair signature

cWW-F

Number of instances in this motif group

8

Unit IDs

4V5S|1|DA|G|2793
4V5S|1|DA|C|2794
4V5S|1|DA|G|2795
4V5S|1|DA|U|2796
4V5S|1|DA|C|2799
4V5S|1|DA|A|2801
4V5S|1|DA|A|2801|||A
4V5S|1|DA|G|2802
4V5S|1|DA|C|2803
4V5S|1|DA|C|2804

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains