HL_4V61_012

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GAAGCAAUGAC

Length

11 nucleotides

Bulged bases

4V61|1|AA|A|426

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|G|421
4V61|1|AA|A|422
4V61|1|AA|A|423
4V61|1|AA|G|424
4V61|1|AA|C|425
4V61|1|AA|A|426
4V61|1|AA|A|427
4V61|1|AA|U|428
4V61|1|AA|G|429
4V61|1|AA|A|430
4V61|1|AA|C|431

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AP

Ribosomal Protein S16