HL_4V61_080

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

CUUCCGGGG

Length

9 nucleotides

Bulged bases

4V61|1|BA|C|2159, 4V61|1|BA|C|2160

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|C|2156
4V61|1|BA|U|2157
4V61|1|BA|U|2158
4V61|1|BA|C|2159
4V61|1|BA|C|2160
4V61|1|BA|G|2161
4V61|1|BA|G|2162
4V61|1|BA|G|2163
4V61|1|BA|G|2164

Current chains

Chain BA

23S rRNA

Nearby chains