HL_4V61_101

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

CAACGUUGAGUUUG

Length

14 nucleotides

Bulged bases

4V61|1|AA|U|1084

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|C|1078
4V61|1|AA|A|1079
4V61|1|AA|A|1080
4V61|1|AA|C|1081
4V61|1|AA|G|1082
4V61|1|AA|U|1083
4V61|1|AA|U|1084
4V61|1|AA|G|1085
4V61|1|AA|A|1086
4V61|1|AA|G|1087
4V61|1|AA|U|1088
4V61|1|AA|U|1089
4V61|1|AA|U|1090
4V61|1|AA|G|1091

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AI

Ribosomal Protein S9

Chain AJ

Ribosomal Protein S10