HL_4V61_102

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GCUGCAACUCGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|G|1261
4V61|1|AA|C|1262
4V61|1|AA|U|1263
4V61|1|AA|G|1264
4V61|1|AA|C|1265
4V61|1|AA|A|1266
4V61|1|AA|A|1267
4V61|1|AA|C|1268
4V61|1|AA|U|1269
4V61|1|AA|C|1270
4V61|1|AA|G|1271
4V61|1|AA|C|1272

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AM

Ribosomal Protein S13

Chain AN

Ribosomal Protein S14

Chain AS

Ribosomal Protein S19