HL_4V63_042

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

4V63|1|BA|G|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V63_042 not in the Motif Atlas

Geometric match to HL_5J7L_136

Geometric discrepancy: 0.1167

The information below is about HL_5J7L_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4V63|1|BA|G|123
4V63|1|BA|G|124
4V63|1|BA|G|125
4V63|1|BA|A|126
4V63|1|BA|A|127
4V63|1|BA|C|128

Current chains

Chain BA

23S RRNA

Nearby chains

Chain B7

50S ribosomal protein L34

Chain BX

50S ribosomal protein L23