HL_4V64_163
3D structure
- PDB id
- 4V64 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- UGCUAACG
- Length
- 8 nucleotides
- Bulged bases (A, C, G, U)
- 958U, 961C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V64_163 not in the Motif Atlas
- Homologous match to HL_4WF9_027
- Geometric discrepancy: 0.1404
- The information below is about HL_4WF9_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
4V64|1|DB|U|955
4V64|1|DB|G|956
4V64|1|DB|C|957
4V64|1|DB|U|958
4V64|1|DB|A|959
4V64|1|DB|A|960
4V64|1|DB|C|961
4V64|1|DB|G|962
Current chains
- Chain DB
- 23S ribosomal RNA
Nearby chains
- Chain DA
- 5S ribosomal RNA; 5S rRNA
- Chain DM
- 50S ribosomal protein L16
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