HL_4V65_005

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUGGGGUAACGGCUCAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|255
4V65|1|A1|U|256
4V65|1|A1|G|257
4V65|1|A1|G|258
4V65|1|A1|G|259
4V65|1|A1|G|260
4V65|1|A1|U|261
4V65|1|A1|A|262
4V65|1|A1|A|263
4V65|1|A1|C|264
4V65|1|A1|G|265
4V65|1|A1|G|266
4V65|1|A1|C|267
4V65|1|A1|U|268
4V65|1|A1|C|269
4V65|1|A1|A|270
4V65|1|A1|C|271

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AJ

30S ribosomal protein S17

Chain AN

30S ribosomal protein S20

Chain BB

Large subunit ribosomal RNA; LSU rRNA