HL_4V65_007

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGAACUGAGACACGGUCC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|318
4V65|1|A1|G|319
4V65|1|A1|A|320
4V65|1|A1|A|321
4V65|1|A1|C|322
4V65|1|A1|U|323
4V65|1|A1|G|324
4V65|1|A1|A|325
4V65|1|A1|G|326
4V65|1|A1|A|327
4V65|1|A1|C|328
4V65|1|A1|A|329
4V65|1|A1|C|330
4V65|1|A1|G|331
4V65|1|A1|G|332
4V65|1|A1|U|333
4V65|1|A1|C|334
4V65|1|A1|C|335

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AI

30S ribosomal protein S16

Chain AN

30S ribosomal protein S20