HL_4V65_042

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGAACUGAAACAUCUAAGUACC

Length

22 nucleotides

Bulged bases

4V65|1|BB|A|196, 4V65|1|BB|A|197, 4V65|1|BB|C|198, 4V65|1|BB|A|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|188
4V65|1|BB|G|189
4V65|1|BB|A|190
4V65|1|BB|A|191
4V65|1|BB|C|192
4V65|1|BB|U|193
4V65|1|BB|G|194
4V65|1|BB|A|195
4V65|1|BB|A|196
4V65|1|BB|A|197
4V65|1|BB|C|198
4V65|1|BB|A|199
4V65|1|BB|U|200
4V65|1|BB|C|201
4V65|1|BB|U|202
4V65|1|BB|A|203
4V65|1|BB|A|204
4V65|1|BB|G|205
4V65|1|BB|U|206
4V65|1|BB|A|207
4V65|1|BB|C|208
4V65|1|BB|C|209

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BE

50S ribosomal protein L15

Chain BS

50S ribosomal protein L31

Chain BV

50S ribosomal protein L34