HL_4V65_044

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CCCAGUAGCGGCGAGCGAACGG

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|C|238
4V65|1|BB|C|239
4V65|1|BB|C|240
4V65|1|BB|A|241
4V65|1|BB|G|242
4V65|1|BB|U|243
4V65|1|BB|A|244
4V65|1|BB|G|245
4V65|1|BB|C|246
4V65|1|BB|G|247
4V65|1|BB|G|248
4V65|1|BB|C|249
4V65|1|BB|G|250
4V65|1|BB|A|251
4V65|1|BB|G|252
4V65|1|BB|C|253
4V65|1|BB|G|254
4V65|1|BB|A|255
4V65|1|BB|A|256
4V65|1|BB|C|257
4V65|1|BB|G|258
4V65|1|BB|G|259

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BE

50S ribosomal protein L15

Chain BW

50S ribosomal protein L35