HL_4V65_056

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GCUAUUUAGGUAGC

Length

14 nucleotides

Bulged bases

4V65|1|BB|U|827, 4V65|1|BB|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|822
4V65|1|BB|C|823
4V65|1|BB|U|824
4V65|1|BB|A|825
4V65|1|BB|U|826
4V65|1|BB|U|827
4V65|1|BB|U|828
4V65|1|BB|A|829
4V65|1|BB|G|830
4V65|1|BB|G|831
4V65|1|BB|U|832
4V65|1|BB|A|833
4V65|1|BB|G|834
4V65|1|BB|C|835

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BE

50S ribosomal protein L15

Chain BP

50S ribosomal protein L27

Chain BW

50S ribosomal protein L35