HL_4V65_064

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CCAACGUUAAUCGGG

Length

15 nucleotides

Bulged bases

4V65|1|BB|A|1322, 4V65|1|BB|U|1325, 4V65|1|BB|U|1326, 4V65|1|BB|U|1329, 4V65|1|BB|G|1332

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|C|1319
4V65|1|BB|C|1320
4V65|1|BB|A|1321
4V65|1|BB|A|1322
4V65|1|BB|C|1323
4V65|1|BB|G|1324
4V65|1|BB|U|1325
4V65|1|BB|U|1326
4V65|1|BB|A|1327
4V65|1|BB|A|1328
4V65|1|BB|U|1329
4V65|1|BB|C|1330
4V65|1|BB|G|1331
4V65|1|BB|G|1332
4V65|1|BB|G|1333

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BL

50S ribosomal protein L22

Chain BM

50S ribosomal protein L23