HL_4V65_074

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUGCAAACACGAAAGUGGACGUAUAC

Length

26 nucleotides

Bulged bases

4V65|1|BB|A|1801, 4V65|1|BB|A|1808, 4V65|1|BB|C|1816, 4V65|1|BB|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|1797
4V65|1|BB|U|1798
4V65|1|BB|G|1799
4V65|1|BB|C|1800
4V65|1|BB|A|1801
4V65|1|BB|A|1802
4V65|1|BB|A|1803
4V65|1|BB|C|1804
4V65|1|BB|A|1805
4V65|1|BB|C|1806
4V65|1|BB|G|1807
4V65|1|BB|A|1808
4V65|1|BB|A|1809
4V65|1|BB|A|1810
4V65|1|BB|G|1811
4V65|1|BB|U|1812
4V65|1|BB|G|1813
4V65|1|BB|G|1814
4V65|1|BB|A|1815
4V65|1|BB|C|1816
4V65|1|BB|G|1817
4V65|1|BB|U|1818
4V65|1|BB|A|1819
4V65|1|BB|U|1820
4V65|1|BB|A|1821
4V65|1|BB|C|1822

Current chains

Chain BB

23S rRNA

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain BN

50S ribosomal protein L2

Chain BS

50S ribosomal protein L31