HL_4V65_089

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAACGUCGUGAGACAGUUC

Length

19 nucleotides

Bulged bases

4V65|1|BB|A|2602, 4V65|1|BB|U|2604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|2588
4V65|1|BB|A|2589
4V65|1|BB|A|2590
4V65|1|BB|C|2591
4V65|1|BB|G|2592
4V65|1|BB|U|2593
4V65|1|BB|C|2594
4V65|1|BB|G|2595
4V65|1|BB|U|2596
4V65|1|BB|G|2597
4V65|1|BB|A|2598
4V65|1|BB|G|2599
4V65|1|BB|A|2600
4V65|1|BB|C|2601
4V65|1|BB|A|2602
4V65|1|BB|G|2603
4V65|1|BB|U|2604
4V65|1|BB|U|2605
4V65|1|BB|C|2606

Current chains

Chain BB

23S rRNA

Nearby chains

Chain AP

Transfer RNA; tRNA

Chain BN

50S ribosomal protein L2