HL_4V65_103
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- 4V65|1|A1|C|330, 4V65|1|A1|G|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V65_103 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.3543
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4V65|1|A1|A|320
4V65|1|A1|A|321
4V65|1|A1|C|322
4V65|1|A1|U|323
4V65|1|A1|G|324
4V65|1|A1|A|325
4V65|1|A1|G|326
4V65|1|A1|A|327
4V65|1|A1|C|328
4V65|1|A1|A|329
4V65|1|A1|C|330
4V65|1|A1|G|331
4V65|1|A1|G|332
4V65|1|A1|U|333
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AI
- 30S ribosomal protein S16
- Chain AN
- 30S ribosomal protein S20
Coloring options: