3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GGAACUGAGACACGGUCC
Length
18 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|G|318
4V66|1|A1|G|319
4V66|1|A1|A|320
4V66|1|A1|A|321
4V66|1|A1|C|322
4V66|1|A1|U|323
4V66|1|A1|G|324
4V66|1|A1|A|325
4V66|1|A1|G|326
4V66|1|A1|A|327
4V66|1|A1|C|328
4V66|1|A1|A|329
4V66|1|A1|C|330
4V66|1|A1|G|331
4V66|1|A1|G|332
4V66|1|A1|U|333
4V66|1|A1|C|334
4V66|1|A1|C|335

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AI
30S ribosomal protein S16
Chain AN
30S ribosomal protein S20

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1036 s