3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GGAUUAGAUACCC
Length
13 nucleotides
Bulged bases
4V66|1|A1|A|790, 4V66|1|A1|G|791, 4V66|1|A1|U|793
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|G|785
4V66|1|A1|G|786
4V66|1|A1|A|787
4V66|1|A1|U|788
4V66|1|A1|U|789
4V66|1|A1|A|790
4V66|1|A1|G|791
4V66|1|A1|A|792
4V66|1|A1|U|793
4V66|1|A1|A|794
4V66|1|A1|C|795
4V66|1|A1|C|796
4V66|1|A1|C|797

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AC
30S ribosomal protein S11
Chain AE
Transfer RNA; tRNA
Chain AM
mRNA model
Chain AP
Transfer RNA; tRNA
Chain AQ
30S ribosomal protein S21
Chain BB
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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