HL_4V66_018

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V66_018 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.321

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V66|1|A1|A|1012
4V66|1|A1|G|1013
4V66|1|A1|A|1014
4V66|1|A1|G|1015
4V66|1|A1|A|1016
4V66|1|A1|U|1017

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S14

Chain AL

30S ribosomal protein S19