HL_4V66_078

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAAAUUCCUUGUCGGGUAAGUUCCGACCUGCAC

Length

33 nucleotides

Bulged bases

4V66|1|BB|A|1938, 4V66|1|BB|A|1952, 4V66|1|BB|A|1960, 4V66|1|BB|A|1966

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|1935
4V66|1|BB|A|1936
4V66|1|BB|A|1937
4V66|1|BB|A|1938
4V66|1|BB|U|1939
4V66|1|BB|U|1940
4V66|1|BB|C|1941
4V66|1|BB|C|1942
4V66|1|BB|U|1943
4V66|1|BB|U|1944
4V66|1|BB|G|1945
4V66|1|BB|U|1946
4V66|1|BB|C|1947
4V66|1|BB|G|1948
4V66|1|BB|G|1949
4V66|1|BB|G|1950
4V66|1|BB|U|1951
4V66|1|BB|A|1952
4V66|1|BB|A|1953
4V66|1|BB|G|1954
4V66|1|BB|U|1955
4V66|1|BB|U|1956
4V66|1|BB|C|1957
4V66|1|BB|C|1958
4V66|1|BB|G|1959
4V66|1|BB|A|1960
4V66|1|BB|C|1961
4V66|1|BB|C|1962
4V66|1|BB|U|1963
4V66|1|BB|G|1964
4V66|1|BB|C|1965
4V66|1|BB|A|1966
4V66|1|BB|C|1967

Current chains

Chain BB

23S rRNA

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain AA

Transfer RNA; tRNA

Chain BD

50S ribosomal protein L14