HL_4V68_049
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- GCUUGUC
- Length
- 7 nucleotides
- Bulged bases
- 4V68|1|BA|U|271|||K, 4V68|1|BA|U|271|||L, 4V68|1|BA|U|271|||N
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V68_049 not in the Motif Atlas
- Geometric match to HL_8P9A_231
- Geometric discrepancy: 0.3729
- The information below is about HL_8P9A_231
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32682.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
4V68|1|BA|G|271|||I
4V68|1|BA|C|271|||J
4V68|1|BA|U|271|||K
4V68|1|BA|U|271|||L
4V68|1|BA|G|271|||M
4V68|1|BA|U|271|||N
4V68|1|BA|C|271|||O
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B1
- 50S ribosomal protein L28
- Chain BI
- 50S ribosomal protein L9
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