HL_4V68_119

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

GUUGCCAGCGGUUCGGCCGGGCACUC

Length

26 nucleotides

Bulged bases

4V68|1|AA|U|1125, 4V68|1|AA|U|1136, 4V68|1|AA|C|1137

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|AA|G|1124
4V68|1|AA|U|1125
4V68|1|AA|U|1126
4V68|1|AA|G|1127
4V68|1|AA|C|1128
4V68|1|AA|C|1129
4V68|1|AA|A|1130
4V68|1|AA|G|1131
4V68|1|AA|C|1132
4V68|1|AA|G|1133
4V68|1|AA|G|1134
4V68|1|AA|U|1135
4V68|1|AA|U|1136
4V68|1|AA|C|1137
4V68|1|AA|G|1138
4V68|1|AA|G|1139
4V68|1|AA|C|1140
4V68|1|AA|C|1141
4V68|1|AA|G|1142
4V68|1|AA|G|1143
4V68|1|AA|G|1144
4V68|1|AA|C|1145
4V68|1|AA|A|1146
4V68|1|AA|C|1147
4V68|1|AA|U|1148
4V68|1|AA|C|1149

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10