HL_4V68_123
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- GGGGAUGACCC
- Length
- 11 nucleotides
- Bulged bases
- 4V68|1|BA|G|1173, 4V68|1|BA|A|1174, 4V68|1|BA|A|1177
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V68_123 not in the Motif Atlas
- Homologous match to HL_7A0S_030
- Geometric discrepancy: 0.5529
- The information below is about HL_7A0S_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V68|1|BA|G|1169
4V68|1|BA|G|1170
4V68|1|BA|G|1171
4V68|1|BA|G|1173
4V68|1|BA|A|1174
4V68|1|BA|U|1175
4V68|1|BA|G|1176
4V68|1|BA|A|1177
4V68|1|BA|C|1178
4V68|1|BA|C|1179
4V68|1|BA|C|1180
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BV
- 50S ribosomal protein L21
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