HL_4V69_037
3D structure
- PDB id
- 4V69 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex-bound E.coli 70S ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- GAUUGAAAAUC
- Length
- 11 nucleotides
- Bulged bases
- 4V69|1|AW|U|33
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V69_037 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3035
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.3
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 5
Unit IDs
4V69|1|AW|G|30
4V69|1|AW|A|31
4V69|1|AW|U|32
4V69|1|AW|U|33
4V69|1|AW|G|34
4V69|1|AW|A|35
4V69|1|AW|A|36
4V69|1|AW|A|37
4V69|1|AW|A|38
4V69|1|AW|U|39
4V69|1|AW|C|40
Current chains
- Chain AW
- P-site tRNA fMet (Unmodified bases except for Thymine 54)
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 30S ribosomal protein S7
- Chain AI
- 30S ribosomal protein S9
- Chain AK
- 30S ribosomal protein S11
- Chain AV
- Transfer RNA; tRNA
- Chain AX
- mRNA
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