HL_4V69_046

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

4V69|1|BB|A|125, 4V69|1|BB|A|126, 4V69|1|BB|A|127

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_046 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1811

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

4V69|1|BB|G|123
4V69|1|BB|G|124
4V69|1|BB|A|125
4V69|1|BB|A|126
4V69|1|BB|A|127
4V69|1|BB|C|128

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BT

50S ribosomal protein L23