HL_4V69_066

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4V69|1|BB|A|781

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_066 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3249

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V69|1|BB|U|779
4V69|1|BB|G|780
4V69|1|BB|A|781
4V69|1|BB|A|782
4V69|1|BB|A|783
4V69|1|BB|G|784
4V69|1|BB|G|785

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2