HL_4V69_103

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_103 not in the Motif Atlas

Homologous match to HL_7RQB_060

Geometric discrepancy: 0.269

The information below is about HL_7RQB_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V69|1|BB|A|2471
4V69|1|BB|G|2472
4V69|1|BB|U|2473
4V69|1|BB|U|2474
4V69|1|BB|C|2475
4V69|1|BB|A|2476
4V69|1|BB|U|2477
4V69|1|BB|A|2478
4V69|1|BB|U|2479

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain AY

A/T-site tRNA Phe

Chain B4

50S ribosomal protein L36

Chain BM

50S ribosomal protein L16