HL_4V6F_009

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

4V6F|1|AA|U|270|||L, 4V6F|1|AA|U|270|||M

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_009 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3287

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4V6F|1|AA|C|270|||K
4V6F|1|AA|U|270|||L
4V6F|1|AA|U|270|||M
4V6F|1|AA|G|270|||N

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain AK

50S RIBOSOMAL PROTEIN L9

Chain AZ

50S RIBOSOMAL PROTEIN L28

Chain CA

Small subunit ribosomal RNA; SSU rRNA