HL_4V6F_019

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

4V6F|1|AA|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_019 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.2252

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4V6F|1|AA|C|611
4V6F|1|AA|G|612
4V6F|1|AA|U|613
4V6F|1|AA|U|614
4V6F|1|AA|G|615
4V6F|1|AA|A|616
4V6F|1|AA|G|617

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain AF

50S RIBOSOMAL PROTEIN L4