HL_4V6F_034

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUGAGAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_034 not in the Motif Atlas

Homologous match to HL_7RQB_033

Geometric discrepancy: 0.1201

The information below is about HL_7RQB_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

4V6F|1|AA|G|1281
4V6F|1|AA|U|1282
4V6F|1|AA|G|1283
4V6F|1|AA|A|1284
4V6F|1|AA|G|1285
4V6F|1|AA|A|1286
4V6F|1|AA|A|1287
4V6F|1|AA|U|1288
4V6F|1|AA|C|1289

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain A0

50S RIBOSOMAL PROTEIN L17

Chain A5

50S RIBOSOMAL PROTEIN L32

Chain AS

50S RIBOSOMAL PROTEIN L22