HL_4V6F_113
3D structure
- PDB id
- 4V6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation complex of the 70S ribosome with three tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUGAA(MIA)AU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6F_113 not in the Motif Atlas
- Homologous match to HL_4V90_033
- Geometric discrepancy: 0.1604
- The information below is about HL_4V90_033
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V6F|1|BD|A|31
4V6F|1|BD|U|32
4V6F|1|BD|U|33
4V6F|1|BD|G|34
4V6F|1|BD|A|35
4V6F|1|BD|A|36
4V6F|1|BD|MIA|37
4V6F|1|BD|A|38
4V6F|1|BD|U|39
Current chains
- Chain BD
- TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37
Nearby chains
- Chain B1
- MRNA
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BC
- Transfer RNA; tRNA
- Chain BJ
- 30S ribosomal protein S7
- Chain BN
- 30S ribosomal protein S11
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