HL_4V6F_156

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGCGAUAA

Length

8 nucleotides

Bulged bases

4V6F|1|DA|U|72

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_156 not in the Motif Atlas

Homologous match to HL_4WF9_001

Geometric discrepancy: 0.2385

The information below is about HL_4WF9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86769.4

Basepair signature

cWW-cWW-cSH-F

Number of instances in this motif group

5

Unit IDs

4V6F|1|DA|U|67
4V6F|1|DA|G|68
4V6F|1|DA|C|69
4V6F|1|DA|G|70
4V6F|1|DA|A|71
4V6F|1|DA|U|72
4V6F|1|DA|A|73
4V6F|1|DA|A|74

Current chains

Chain DA

23S RRNA

Nearby chains

Chain D7

50S RIBOSOMAL PROTEIN L34

Chain DT

50S RIBOSOMAL PROTEIN L23

Chain DW

50S RIBOSOMAL PROTEIN L29