HL_4V6F_207

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

4V6F|1|DA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_207 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.1805

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4V6F|1|DA|G|1949
4V6F|1|DA|G|1950
4V6F|1|DA|U|1951
4V6F|1|DA|A|1952
4V6F|1|DA|A|1953
4V6F|1|DA|G|1954
4V6F|1|DA|U|1955
4V6F|1|DA|U|1956
4V6F|1|DA|C|1957

Current chains

Chain DA

23S RRNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA

Chain DN

50S RIBOSOMAL PROTEIN L14