HL_4V6F_210

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGAUG

Length

6 nucleotides

Bulged bases

4V6F|1|DA|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6F_210 not in the Motif Atlas

Homologous match to HL_7RQB_052

Geometric discrepancy: 0.4004

The information below is about HL_7RQB_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98426.1

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

4V6F|1|DA|C|2209
4V6F|1|DA|G|2210
4V6F|1|DA|G|2211
4V6F|1|DA|A|2212
4V6F|1|DA|U|2213
4V6F|1|DA|G|2215

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DD

50S RIBOSOMAL PROTEIN L2

Chain DK

50S RIBOSOMAL PROTEIN L9

Chain DZ

50S RIBOSOMAL PROTEIN L28