Motif HL_98426.1 Version HL_98426.1 of this group appears in releases 3.80 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7RQB_052 | 7RQB | 0.3031 | 3 | 1A | LSU rRNA | C | 2205 | A | 2208 | G | 2219 | cWW | |
| 2 | HL_5TBW_004 | 5TBW | 0.1716 | 2 | 1 | LSU rRNA | C | 132 | U | 134 | G | 136 | cWW | |
| 3 | HL_8C3A_004 | 8C3A | 0.0000 | 2 | 1 | LSU rRNA | C | 131 | U | 133 | G | 135 | cWW | |
| 4 | HL_5J7L_176 | 5J7L | 0.2484 | 1 | DA | LSU rRNA | C | 1728 | C | 1730 | G | 1731 | ncWW | |
| 5 | HL_5TBW_068 | 5TBW | 0.2187 | 1 | 1 | LSU rRNA | C | 3194 | U | 3196 | G | 3197 | cWW | |
| 6 | HL_6LT7_001 | 6LT7 | 0.3581 | 1 | C | 50-mer RNA | C | 42 | U | 45 | G | 46 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUG | 2 |
| CGGAUG | 1 |
| CUUCG | 1 |
| CUUUG | 1 |
| CUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UU | 2 |
| GGAU | 1 |
| UUC | 1 |
| UUU | 1 |
| UC | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: