HL_4V6G_182

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V6G_182 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.251

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V6G|1|DA|G|1171
4V6G|1|DA|G|1173
4V6G|1|DA|A|1174
4V6G|1|DA|U|1175
4V6G|1|DA|G|1176
4V6G|1|DA|A|1177
4V6G|1|DA|C|1178

Current chains

Chain DA

23S ribosomal RNA

Nearby chains