HL_4V6K_019

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

CCUUUUGUAUAAUG

Length

14 nucleotides

Bulged bases

4V6K|1|AB|A|574

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|C|564
4V6K|1|AB|C|565
4V6K|1|AB|U|566
4V6K|1|AB|U|567
4V6K|1|AB|U|568
4V6K|1|AB|U|569
4V6K|1|AB|G|570
4V6K|1|AB|U|571
4V6K|1|AB|A|572
4V6K|1|AB|U|573
4V6K|1|AB|A|574
4V6K|1|AB|A|575
4V6K|1|AB|U|576
4V6K|1|AB|G|577

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AM

50S ribosomal protein L15

Chain AR

50S ribosomal protein L20

Chain AS

50S ribosomal protein L21