HL_4V6K_055

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

ACUG(OMG)GGCGGU

Length

11 nucleotides

Bulged bases

4V6K|1|AB|G|2250

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|A|2247
4V6K|1|AB|C|2248
4V6K|1|AB|U|2249
4V6K|1|AB|G|2250
4V6K|1|AB|OMG|2251
4V6K|1|AB|G|2252
4V6K|1|AB|G|2253
4V6K|1|AB|C|2254
4V6K|1|AB|G|2255
4V6K|1|AB|G|2256
4V6K|1|AB|U|2257

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AN

50S ribosomal protein L16

Chain AX

50S ribosomal protein L27

Chain BE

Transfer RNA; tRNA