HL_4V6K_117

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

ACGCUUAGGCGU

Length

12 nucleotides

Bulged bases

4V6K|1|AB|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|A|541
4V6K|1|AB|C|542
4V6K|1|AB|G|543
4V6K|1|AB|C|544
4V6K|1|AB|U|545
4V6K|1|AB|U|546
4V6K|1|AB|A|547
4V6K|1|AB|G|548
4V6K|1|AB|G|549
4V6K|1|AB|C|550
4V6K|1|AB|G|551
4V6K|1|AB|U|552

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain AR

50S ribosomal protein L20

Chain AS

50S ribosomal protein L21