HL_4V6L_017

3D structure

PDB id

4V6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

13.2 Å

Loop

Sequence

GGAUUAGAUACCC

Length

13 nucleotides

Bulged bases

4V6L|1|AA|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6L|1|AA|G|785
4V6L|1|AA|G|786
4V6L|1|AA|A|787
4V6L|1|AA|U|788
4V6L|1|AA|U|789
4V6L|1|AA|A|790
4V6L|1|AA|G|791
4V6L|1|AA|A|792
4V6L|1|AA|U|793
4V6L|1|AA|A|794
4V6L|1|AA|C|795
4V6L|1|AA|C|796
4V6L|1|AA|C|797

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

mRNA

Chain AE

Transfer RNA; tRNA

Chain AO

30S ribosomal protein S11

Chain AY

30S ribosomal protein S21

Chain BB

Large subunit ribosomal RNA; LSU rRNA