HL_4V6L_067
3D structure
- PDB id
- 4V6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into cognate vs. near-cognate discrimination during decoding.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.2 Å
Loop
- Sequence
- GGAAACAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V6L_067 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3945
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V6L|1|BB|G|977
4V6L|1|BB|G|978
4V6L|1|BB|A|979
4V6L|1|BB|A|980
4V6L|1|BB|A|981
4V6L|1|BB|C|982
4V6L|1|BB|A|983
4V6L|1|BB|A|984
4V6L|1|BB|C|985
4V6L|1|BB|C|986
Current chains
- Chain BB
- 50S ribosomal RNA 23S
Nearby chains
- Chain BA
- 5S ribosomal RNA; 5S rRNA
- Chain BR
- 50S ribosomal protein L20
- Chain BS
- 50S ribosomal protein L21
- Chain Ba
- 50S ribosomal protein L30
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