HL_4V6N_019

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

4V6N|1|AB|U|567

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|AB|U|566
4V6N|1|AB|U|567
4V6N|1|AB|U|568
4V6N|1|AB|U|569
4V6N|1|AB|G|570
4V6N|1|AB|U|571
4V6N|1|AB|A|572
4V6N|1|AB|U|573
4V6N|1|AB|A|574
4V6N|1|AB|A|575

Current chains

Chain AB

23S ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L15

Chain AT

50S ribosomal protein L21