HL_4V6N_069

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UUGAAGACGACGA

Length

13 nucleotides

Bulged bases

4V6N|1|AB|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|AB|U|2817
4V6N|1|AB|U|2818
4V6N|1|AB|G|2819
4V6N|1|AB|A|2820
4V6N|1|AB|A|2821
4V6N|1|AB|G|2822
4V6N|1|AB|A|2823
4V6N|1|AB|C|2824
4V6N|1|AB|G|2825
4V6N|1|AB|A|2826
4V6N|1|AB|C|2827
4V6N|1|AB|G|2828
4V6N|1|AB|A|2829

Current chains

Chain AB

23S ribosomal RNA

Nearby chains

Chain A3

50S ribosomal protein L32

Chain AE

50S ribosomal protein L3

Chain AP

50S ribosomal protein L17