HL_4V6N_099

3D structure

PDB id

4V6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

CUGCAACUCG

Length

10 nucleotides

Bulged bases

4V6N|1|BA|C|1322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6N|1|BA|C|1314
4V6N|1|BA|U|1315
4V6N|1|BA|G|1316
4V6N|1|BA|C|1317
4V6N|1|BA|A|1318
4V6N|1|BA|A|1319
4V6N|1|BA|C|1320
4V6N|1|BA|U|1321
4V6N|1|BA|C|1322
4V6N|1|BA|G|1323

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain A2

50S ribosomal protein L31

Chain BP

30S ribosomal protein S13

Chain BQ

30S ribosomal protein S14

Chain BV

30S ribosomal protein S19