HL_4V6P_052

3D structure

PDB id

4V6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)

Experimental method

ELECTRON MICROSCOPY

Resolution

13.5 Å

Loop

Sequence

GACACGUGGUAUC

Length

13 nucleotides

Bulged bases

4V6P|1|BB|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6P|1|BB|G|381
4V6P|1|BB|A|382
4V6P|1|BB|C|383
4V6P|1|BB|A|384
4V6P|1|BB|C|385
4V6P|1|BB|G|386
4V6P|1|BB|U|387
4V6P|1|BB|G|388
4V6P|1|BB|G|389
4V6P|1|BB|U|390
4V6P|1|BB|A|391
4V6P|1|BB|U|392
4V6P|1|BB|C|393

Current chains

Chain BB

23S ribomosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L15

Chain BZ

50S ribosomal protein L28